Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 AC093677.2-201ENST00000600169 1863 ntBASIC17.21■□□□□ 0.35
TNFRSF11BO00300 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 POM121L13P-201ENST00000422362 380 ntBASIC17.21■□□□□ 0.35
TNFRSF11BO00300 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 AL357033.4-201ENST00000617703 1807 ntBASIC17.21■□□□□ 0.35
TNFRSF11BO00300 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TNFRSF11BO00300 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
TNFRSF11BO00300 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.21■□□□□ 0.34
TNFRSF11BO00300 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 POU5F1P3-201ENST00000428824 1078 ntBASIC17.2■□□□□ 0.34
TNFRSF11BO00300 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 AC098934.4-201ENST00000564127 592 ntBASIC17.2■□□□□ 0.34
TNFRSF11BO00300 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.2■□□□□ 0.34
TNFRSF11BO00300 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.2■□□□□ 0.34
TNFRSF11BO00300 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 AC138028.4-201ENST00000564984 1845 ntBASIC17.19■□□□□ 0.34
TNFRSF11BO00300 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TNFRSF11BO00300 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms