Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LIN28AP1-201ENST00000429574 405 ntBASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 ATP5G1P1-201ENST00000448724 379 ntBASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 AP006587.1-201ENST00000534129 1502 ntBASIC20.94■□□□□ 0.94
SPDYE4A6NLX3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDYE4A6NLX3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 PRORSD1P-202ENST00000563365 2154 ntBASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 FITM1-202ENST00000559294 800 ntBASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 AL031985.4-201ENST00000642138 673 ntBASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 CYP2D8P-201ENST00000433633 1490 ntBASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDYE4A6NLX3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDYE4A6NLX3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms