Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC163A0A0D9SF12 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 POLD2P1-201ENST00000511220 997 ntBASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC163A0A0D9SF12 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 KRT18P41-201ENST00000518924 1277 ntBASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 MIR7706-201ENST00000613747 67 ntBASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 FAM215A-202ENST00000632077 792 ntBASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC163A0A0D9SF12 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC163A0A0D9SF12 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 FGFR3P6-201ENST00000457012 610 ntBASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC163A0A0D9SF12 TREX1-205ENST00000625293 1783 ntBASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC163A0A0D9SF12 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms