Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 AC008735.5-201ENST00000623544 497 ntBASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
ARFGEF1Q9Y6D6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 RPS2P1-201ENST00000434010 821 ntBASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 AC006333.2-201ENST00000607957 2099 ntBASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 AC007967.2-201ENST00000432613 625 ntBASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 KRT18P3-201ENST00000451602 1288 ntBASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.68■■□□□ 1.22
ARFGEF1Q9Y6D6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 AC092910.1-201ENST00000482027 1129 ntBASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 AC002347.1-201ENST00000569543 541 ntBASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ARFGEF1Q9Y6D6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 MIR3197-201ENST00000582241 73 ntBASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 AC112482.1-201ENST00000492080 688 ntBASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 AC113404.2-201ENST00000507884 177 ntBASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
ARFGEF1Q9Y6D6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 LINC01521-201ENST00000504184 1943 ntBASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 AL138831.2-201ENST00000606564 490 ntBASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.65■■□□□ 1.22
ARFGEF1Q9Y6D6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
ARFGEF1Q9Y6D6 AL391422.3-201ENST00000603791 2761 ntBASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms