Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL512353.2-201ENST00000448759 1962 ntBASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HRH3Q9Y5N1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 AC036111.1-201ENST00000533973 1582 ntBASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 RCC2P3-201ENST00000418112 1537 ntBASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HRH3Q9Y5N1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 AC004408.2-201ENST00000623613 2777 ntBASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 AL441883.1-201ENST00000566170 1045 ntBASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 LINC01238-205ENST00000567549 1107 ntBASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 CR769767.2-201ENST00000622735 460 ntBASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 FZD10-202ENST00000539839 3282 ntBASIC17.15■□□□□ 0.34
HRH3Q9Y5N1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HRH3Q9Y5N1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms