Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 NOC2LP1-202ENST00000452600 2235 ntBASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 NOC2LP2-201ENST00000407594 1944 ntBASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHGA11Q9Y5H2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 RCC2P3-201ENST00000418112 1537 ntBASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 CA15P1-201ENST00000481698 905 ntBASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGA11Q9Y5H2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 BCL2-203ENST00000589955 5011 ntBASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AP003071.4-201ENST00000562276 1284 ntBASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 MYC-208ENST00000641036 567 ntBASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGA11Q9Y5H2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGA11Q9Y5H2 AL109659.2-201ENST00000606809 1674 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms