Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 AC099343.3-201ENST00000605834 2503 ntBASIC18.51■□□□□ 0.55
TSR3Q9UJK0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.51■□□□□ 0.55
TSR3Q9UJK0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 RCC2P3-201ENST00000418112 1537 ntBASIC18.5■□□□□ 0.55
TSR3Q9UJK0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.5■□□□□ 0.55
TSR3Q9UJK0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 AC008622.2-201ENST00000617006 1229 ntBASIC18.5■□□□□ 0.55
TSR3Q9UJK0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TSR3Q9UJK0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 AC096733.2-201ENST00000609937 1394 ntBASIC18.49■□□□□ 0.55
TSR3Q9UJK0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 AL031598.1-201ENST00000561511 1773 ntBASIC18.49■□□□□ 0.55
TSR3Q9UJK0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
TSR3Q9UJK0 KRT8P9-201ENST00000558927 1449 ntBASIC18.49■□□□□ 0.55
TSR3Q9UJK0 KRT17P2-201ENST00000300992 1314 ntBASIC18.49■□□□□ 0.55
TSR3Q9UJK0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 AC005082.1-201ENST00000413042 2259 ntBASIC18.48■□□□□ 0.55
TSR3Q9UJK0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.48■□□□□ 0.55
TSR3Q9UJK0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TSR3Q9UJK0 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.48■□□□□ 0.55
TSR3Q9UJK0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms