Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NCDNQ9UBB6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 KRT18P23-201ENST00000435622 1283 ntBASIC18.43■□□□□ 0.54
NCDNQ9UBB6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 AC010240.3-201ENST00000607688 395 ntBASIC18.43■□□□□ 0.54
NCDNQ9UBB6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 AC027601.4-201ENST00000611259 610 ntBASIC18.43■□□□□ 0.54
NCDNQ9UBB6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NCDNQ9UBB6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 RPS2P28-201ENST00000314255 741 ntBASIC18.42■□□□□ 0.54
NCDNQ9UBB6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 AC018712.1-201ENST00000455767 687 ntBASIC18.42■□□□□ 0.54
NCDNQ9UBB6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NCDNQ9UBB6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 MED15P5-201ENST00000423150 992 ntBASIC18.41■□□□□ 0.54
NCDNQ9UBB6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 AP005901.3-202ENST00000581653 237 ntBASIC18.41■□□□□ 0.54
NCDNQ9UBB6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NCDNQ9UBB6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NCDNQ9UBB6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms