Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 TREX1-205ENST00000625293 1783 ntBASIC18.63■□□□□ 0.57
CHRDQ9H2X0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHRDQ9H2X0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 BX842568.4-201ENST00000421222 227 ntBASIC18.62■□□□□ 0.57
CHRDQ9H2X0 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 AC096582.2-201ENST00000510860 516 ntBASIC18.62■□□□□ 0.57
CHRDQ9H2X0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 TERC-201ENST00000602385 541 ntBASIC18.62■□□□□ 0.57
CHRDQ9H2X0 MIR7706-201ENST00000613747 67 ntBASIC18.62■□□□□ 0.57
CHRDQ9H2X0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRDQ9H2X0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 AC139887.3-201ENST00000568585 713 ntBASIC18.61■□□□□ 0.57
CHRDQ9H2X0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHRDQ9H2X0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 FEM1AP3-201ENST00000403722 1741 ntBASIC18.6■□□□□ 0.57
CHRDQ9H2X0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 AC132008.2-207ENST00000454517 770 ntBASIC18.6■□□□□ 0.57
CHRDQ9H2X0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 RPL13AP23-201ENST00000480739 586 ntBASIC18.6■□□□□ 0.57
CHRDQ9H2X0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRDQ9H2X0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms