Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 INGX-201ENST00000359239 846 ntBASIC16.59■□□□□ 0.25
USB1Q9BQ65 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 RNF152P1-201ENST00000397754 604 ntBASIC16.59■□□□□ 0.25
USB1Q9BQ65 AK4P3-201ENST00000418260 669 ntBASIC16.59■□□□□ 0.25
USB1Q9BQ65 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 AC140113.3-201ENST00000605663 199 ntBASIC16.59■□□□□ 0.25
USB1Q9BQ65 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
USB1Q9BQ65 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
USB1Q9BQ65 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USB1Q9BQ65 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
USB1Q9BQ65 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
USB1Q9BQ65 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.58■□□□□ 0.25
USB1Q9BQ65 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.58■□□□□ 0.25
USB1Q9BQ65 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
USB1Q9BQ65 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
USB1Q9BQ65 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 HOMER2P1-201ENST00000455653 964 ntBASIC16.58■□□□□ 0.24
USB1Q9BQ65 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
USB1Q9BQ65 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.58■□□□□ 0.24
USB1Q9BQ65 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 AC104076.2-201ENST00000448912 469 ntBASIC16.57■□□□□ 0.24
USB1Q9BQ65 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
USB1Q9BQ65 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.57■□□□□ 0.24
USB1Q9BQ65 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.56■□□□□ 0.24
USB1Q9BQ65 KRT8P3-201ENST00000519669 1449 ntBASIC16.56■□□□□ 0.24
USB1Q9BQ65 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
USB1Q9BQ65 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.56■□□□□ 0.24
USB1Q9BQ65 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms