Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 AC091607.1-201ENST00000490318 1060 ntBASIC18.78■□□□□ 0.6
PHOX2BQ99453 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 AC005332.3-201ENST00000589904 676 ntBASIC18.78■□□□□ 0.6
PHOX2BQ99453 AL596442.2-201ENST00000610240 980 ntBASIC18.78■□□□□ 0.6
PHOX2BQ99453 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.78■□□□□ 0.6
PHOX2BQ99453 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHOX2BQ99453 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 AC145285.3-201ENST00000564603 959 ntBASIC18.77■□□□□ 0.6
PHOX2BQ99453 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHOX2BQ99453 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.77■□□□□ 0.6
PHOX2BQ99453 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHOX2BQ99453 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHOX2BQ99453 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.77■□□□□ 0.59
PHOX2BQ99453 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AC087289.5-201ENST00000586076 3175 ntBASIC18.76■□□□□ 0.59
PHOX2BQ99453 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AP005212.1-201ENST00000581547 1997 ntBASIC18.76■□□□□ 0.59
PHOX2BQ99453 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 STK33P1-201ENST00000423835 1218 ntBASIC18.76■□□□□ 0.59
PHOX2BQ99453 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.76■□□□□ 0.59
PHOX2BQ99453 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHOX2BQ99453 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHOX2BQ99453 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.75■□□□□ 0.59
PHOX2BQ99453 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms