Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
UBE2E3Q969T4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AC092338.2-201ENST00000568827 1415 ntBASIC17.9■□□□□ 0.46
UBE2E3Q969T4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 TSPY14P-201ENST00000303979 915 ntBASIC17.9■□□□□ 0.46
UBE2E3Q969T4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AP003041.3-201ENST00000527151 707 ntBASIC17.9■□□□□ 0.46
UBE2E3Q969T4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBE2E3Q969T4 AC005082.1-201ENST00000413042 2259 ntBASIC17.89■□□□□ 0.46
UBE2E3Q969T4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
UBE2E3Q969T4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
UBE2E3Q969T4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 MMP23A-201ENST00000234610 1017 ntBASIC17.89■□□□□ 0.45
UBE2E3Q969T4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.89■□□□□ 0.45
UBE2E3Q969T4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.88■□□□□ 0.45
UBE2E3Q969T4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 NAPSB-206ENST00000562112 1266 ntBASIC17.88■□□□□ 0.45
UBE2E3Q969T4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 KRT8P7-201ENST00000533003 1432 ntBASIC17.88■□□□□ 0.45
UBE2E3Q969T4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
UBE2E3Q969T4 MYLKP1-201ENST00000509077 1580 ntBASIC17.87■□□□□ 0.45
UBE2E3Q969T4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2E3Q969T4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2E3Q969T4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2E3Q969T4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
UBE2E3Q969T4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms