Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC31.83■■■□□ 2.69
TRIM41Q8WV44 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
TRIM41Q8WV44 AC036111.1-201ENST00000533973 1582 ntBASIC31.82■■■□□ 2.68
TRIM41Q8WV44 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 COX20P2-201ENST00000452636 358 ntBASIC31.82■■■□□ 2.68
TRIM41Q8WV44 LHX6-205ENST00000464484 666 ntTSL 2 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 SLC25A24-204ENST00000569674 2357 ntBASIC31.82■■■□□ 2.68
TRIM41Q8WV44 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC31.82■■■□□ 2.68
TRIM41Q8WV44 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 KATNBL1P6-202ENST00000562413 1466 ntBASIC31.81■■■□□ 2.68
TRIM41Q8WV44 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM41Q8WV44 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 NEK4P2-201ENST00000580004 1012 ntBASIC31.8■■■□□ 2.68
TRIM41Q8WV44 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM41Q8WV44 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 MCCD1P1-208ENST00000445732 328 ntBASIC31.79■■■□□ 2.68
TRIM41Q8WV44 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 RNPS1P1-201ENST00000507437 918 ntBASIC31.79■■■□□ 2.68
TRIM41Q8WV44 AP000867.3-201ENST00000524675 377 ntBASIC31.79■■■□□ 2.68
TRIM41Q8WV44 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM41Q8WV44 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 UPF3AP3-201ENST00000420996 769 ntBASIC31.78■■■□□ 2.68
TRIM41Q8WV44 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 RCC2P3-201ENST00000418112 1537 ntBASIC31.78■■■□□ 2.68
TRIM41Q8WV44 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC31.78■■■□□ 2.68
TRIM41Q8WV44 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 DFFB-203ENST00000341385 572 ntTSL 5 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 AC104819.1-201ENST00000504587 486 ntBASIC31.77■■■□□ 2.68
TRIM41Q8WV44 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 AC010327.4-202ENST00000591484 748 ntBASIC31.77■■■□□ 2.68
TRIM41Q8WV44 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC31.77■■■□□ 2.68
TRIM41Q8WV44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
TRIM41Q8WV44 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC31.76■■■□□ 2.68
TRIM41Q8WV44 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
TRIM41Q8WV44 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 AL161938.1-201ENST00000569833 2180 ntBASIC31.76■■■□□ 2.67
TRIM41Q8WV44 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM41Q8WV44 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms