Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 KRT18P23-201ENST00000435622 1283 ntBASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCUBE3Q8IX30 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC126763.1-201ENST00000552015 2118 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC099343.3-201ENST00000605834 2503 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 BX664615.1-201ENST00000443558 458 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 NEK4P2-201ENST00000580004 1012 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC139887.4-201ENST00000607877 719 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC024243.1-201ENST00000609234 778 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC112497.1-201ENST00000624824 639 ntBASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCUBE3Q8IX30 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 HOXB1-202ENST00000577092 1414 ntBASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 KRT18P41-201ENST00000518924 1277 ntBASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCUBE3Q8IX30 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCUBE3Q8IX30 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms