Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM48Q8IWZ4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 GCSHP2-201ENST00000560971 527 ntBASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM48Q8IWZ4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AC018445.3-201ENST00000624177 1945 ntBASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AC098818.2-201ENST00000564925 2320 ntBASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AL109659.2-201ENST00000606809 1674 ntBASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM48Q8IWZ4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM48Q8IWZ4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms