Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 AP006288.1-201ENST00000446065 395 ntBASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 DNAJB3-202ENST00000449667 1266 ntBASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 AC092910.1-201ENST00000482027 1129 ntBASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 AC011467.2-201ENST00000598425 242 ntBASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ABCA9Q8IUA7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 RPS2P28-201ENST00000314255 741 ntBASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 OR7E14P-202ENST00000530490 1290 ntBASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
ABCA9Q8IUA7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 AC134684.3-201ENST00000641758 218 ntBASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 MTMR9LP-203ENST00000426597 1545 ntBASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 HLA-J-201ENST00000462773 1622 ntBASIC28.23■■■□□ 2.11
ABCA9Q8IUA7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ABCA9Q8IUA7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 KRT18P3-201ENST00000451602 1288 ntBASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC28.21■■■□□ 2.11
ABCA9Q8IUA7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC28.2■■■□□ 2.11
ABCA9Q8IUA7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC28.2■■■□□ 2.11
ABCA9Q8IUA7 FEM1AP3-201ENST00000403722 1741 ntBASIC28.2■■■□□ 2.11
ABCA9Q8IUA7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ABCA9Q8IUA7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 ABCD1P5-201ENST00000445663 754 ntBASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
ABCA9Q8IUA7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 IRX1P1-201ENST00000438849 1838 ntBASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC28.19■■■□□ 2.1
ABCA9Q8IUA7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms