Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 AL512353.2-201ENST00000448759 1962 ntBASIC15.66■□□□□ 0.1
CSMD2Q7Z408 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 AC106028.4-201ENST00000614509 607 ntBASIC15.66■□□□□ 0.1
CSMD2Q7Z408 MIR1199-201ENST00000621445 119 ntBASIC15.66■□□□□ 0.1
CSMD2Q7Z408 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 AC004817.3-201ENST00000602957 2129 ntBASIC15.65■□□□□ 0.1
CSMD2Q7Z408 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.65■□□□□ 0.1
CSMD2Q7Z408 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CSMD2Q7Z408 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.64■□□□□ 0.1
CSMD2Q7Z408 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.64■□□□□ 0.1
CSMD2Q7Z408 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.1
CSMD2Q7Z408 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 LINC01521-201ENST00000504184 1943 ntBASIC15.64■□□□□ 0.09
CSMD2Q7Z408 ALG1L5P-201ENST00000482043 771 ntBASIC15.64■□□□□ 0.09
CSMD2Q7Z408 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 HLA-J-201ENST00000462773 1622 ntBASIC15.64■□□□□ 0.09
CSMD2Q7Z408 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 AC002347.1-201ENST00000569543 541 ntBASIC15.64■□□□□ 0.09
CSMD2Q7Z408 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 Z83851.2-201ENST00000609564 659 ntBASIC15.64■□□□□ 0.09
CSMD2Q7Z408 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSMD2Q7Z408 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 AP003733.1-201ENST00000491725 852 ntBASIC15.63■□□□□ 0.09
CSMD2Q7Z408 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 GUSBP12-201ENST00000513727 720 ntBASIC15.63■□□□□ 0.09
CSMD2Q7Z408 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSMD2Q7Z408 AP005117.1-201ENST00000584346 1413 ntBASIC15.63■□□□□ 0.09
CSMD2Q7Z408 AL162377.1-201ENST00000618844 1793 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms