Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTCRAQ6ISU1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 RFPL4AP1-201ENST00000530883 850 ntBASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 AC092364.2-202ENST00000597012 1073 ntBASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTCRAQ6ISU1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 AC007967.2-201ENST00000432613 625 ntBASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 AP006288.1-201ENST00000446065 395 ntBASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 MTDHP5-201ENST00000598980 586 ntBASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTCRAQ6ISU1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AC112777.1-201ENST00000540175 1423 ntBASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AP005117.1-201ENST00000584346 1413 ntBASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AC023274.1-201ENST00000418278 595 ntBASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AC005336.2-201ENST00000593183 939 ntBASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTCRAQ6ISU1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 AC026310.3-201ENST00000625186 2373 ntBASIC19.1■□□□□ 0.65
PTCRAQ6ISU1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms