Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 LINC01521-201ENST00000504184 1943 ntBASIC23.4■■□□□ 1.34
RC3H1Q5TC82 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 AC092865.5-201ENST00000545435 363 ntBASIC23.4■■□□□ 1.34
RC3H1Q5TC82 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 AC005336.2-201ENST00000593183 939 ntBASIC23.4■■□□□ 1.34
RC3H1Q5TC82 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RC3H1Q5TC82 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.39■■□□□ 1.34
RC3H1Q5TC82 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 AC092183.1-201ENST00000469884 875 ntBASIC23.39■■□□□ 1.33
RC3H1Q5TC82 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RC3H1Q5TC82 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 HEIH-201ENST00000623091 1652 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 TP73-AS1-210ENST00000637775 1455 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 MIR1233-2-201ENST00000408138 82 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 MIR1233-1-201ENST00000408722 82 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 HNRNPDP1-201ENST00000439535 754 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 AC073648.2-201ENST00000510116 352 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 TERC-201ENST00000602385 541 ntBASIC23.38■■□□□ 1.33
RC3H1Q5TC82 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RC3H1Q5TC82 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 PAN3-AS1-201ENST00000563843 1351 ntBASIC23.37■■□□□ 1.33
RC3H1Q5TC82 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 AC125437.2-201ENST00000625180 2167 ntBASIC23.37■■□□□ 1.33
RC3H1Q5TC82 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RC3H1Q5TC82 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC23.36■■□□□ 1.33
RC3H1Q5TC82 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms