Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRK2Q5S007 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRK2Q5S007 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 AC007274.1-201ENST00000439805 662 ntBASIC16.1■□□□□ 0.17
LRRK2Q5S007 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 AC093512.1-201ENST00000617969 520 ntBASIC16.1■□□□□ 0.17
LRRK2Q5S007 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRK2Q5S007 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRK2Q5S007 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.09■□□□□ 0.17
LRRK2Q5S007 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRK2Q5S007 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRK2Q5S007 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRK2Q5S007 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LRRK2Q5S007 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LRRK2Q5S007 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.08■□□□□ 0.17
LRRK2Q5S007 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRRK2Q5S007 PRSS29P-201ENST00000440800 595 ntBASIC16.08■□□□□ 0.17
LRRK2Q5S007 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRK2Q5S007 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRK2Q5S007 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRK2Q5S007 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRK2Q5S007 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRRK2Q5S007 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.08■□□□□ 0.16
LRRK2Q5S007 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRRK2Q5S007 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRRK2Q5S007 AL138831.2-201ENST00000606564 490 ntBASIC16.08■□□□□ 0.16
LRRK2Q5S007 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRK2Q5S007 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.08■□□□□ 0.16
LRRK2Q5S007 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRRK2Q5S007 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.07■□□□□ 0.16
LRRK2Q5S007 AC138761.1-201ENST00000584393 385 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms