Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
USP46P62068 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 UPK3BP1-201ENST00000428678 509 ntBASIC19.57■□□□□ 0.72
USP46P62068 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
USP46P62068 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
USP46P62068 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.57■□□□□ 0.72
USP46P62068 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.57■□□□□ 0.72
USP46P62068 AC079602.3-201ENST00000623931 403 ntBASIC19.57■□□□□ 0.72
USP46P62068 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
USP46P62068 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
USP46P62068 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.56■□□□□ 0.72
USP46P62068 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 AC006333.2-201ENST00000607957 2099 ntBASIC19.56■□□□□ 0.72
USP46P62068 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.56■□□□□ 0.72
USP46P62068 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.56■□□□□ 0.72
USP46P62068 AC034232.1-201ENST00000506026 1064 ntBASIC19.56■□□□□ 0.72
USP46P62068 VENTXP5-201ENST00000523979 775 ntBASIC19.56■□□□□ 0.72
USP46P62068 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.56■□□□□ 0.72
USP46P62068 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP46P62068 AL136038.3-201ENST00000561909 1096 ntBASIC19.56■□□□□ 0.72
USP46P62068 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.56■□□□□ 0.72
USP46P62068 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.56■□□□□ 0.72
USP46P62068 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 AC116407.4-201ENST00000623319 1061 ntBASIC19.56■□□□□ 0.72
USP46P62068 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.56■□□□□ 0.72
USP46P62068 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 IER3-202ENST00000376377 1350 ntBASIC19.56■□□□□ 0.72
USP46P62068 MTMR9LP-203ENST00000426597 1545 ntBASIC19.56■□□□□ 0.72
USP46P62068 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP46P62068 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
USP46P62068 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.56■□□□□ 0.72
USP46P62068 AL357033.4-201ENST00000617703 1807 ntBASIC19.55■□□□□ 0.72
USP46P62068 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
USP46P62068 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP46P62068 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.55■□□□□ 0.72
USP46P62068 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.55■□□□□ 0.72
USP46P62068 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.55■□□□□ 0.72
USP46P62068 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.55■□□□□ 0.72
USP46P62068 HOXB1-202ENST00000577092 1414 ntBASIC19.55■□□□□ 0.72
USP46P62068 MIR3917-201ENST00000580971 93 ntBASIC19.55■□□□□ 0.72
USP46P62068 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.55■□□□□ 0.72
USP46P62068 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
USP46P62068 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
USP46P62068 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.55■□□□□ 0.72
USP46P62068 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP46P62068 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.54■□□□□ 0.72
USP46P62068 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.54■□□□□ 0.72
USP46P62068 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP46P62068 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms