Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.67■■□□□ 1.38
KCNQ4P56696 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.67■■□□□ 1.38
KCNQ4P56696 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.67■■□□□ 1.38
KCNQ4P56696 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.67■■□□□ 1.38
KCNQ4P56696 PMS2P2-201ENST00000425039 1128 ntBASIC23.67■■□□□ 1.38
KCNQ4P56696 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.67■■□□□ 1.38
KCNQ4P56696 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 IGHV3-22-201ENST00000520721 359 ntBASIC23.67■■□□□ 1.38
KCNQ4P56696 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.67■■□□□ 1.38
KCNQ4P56696 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.67■■□□□ 1.38
KCNQ4P56696 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.67■■□□□ 1.38
KCNQ4P56696 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 AC005336.2-201ENST00000593183 939 ntBASIC23.67■■□□□ 1.38
KCNQ4P56696 AL357033.4-201ENST00000617703 1807 ntBASIC23.67■■□□□ 1.38
KCNQ4P56696 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNQ4P56696 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KCNQ4P56696 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.67■■□□□ 1.38
KCNQ4P56696 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.66■■□□□ 1.38
KCNQ4P56696 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
KCNQ4P56696 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.66■■□□□ 1.38
KCNQ4P56696 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
KCNQ4P56696 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.66■■□□□ 1.38
KCNQ4P56696 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNQ4P56696 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.65■■□□□ 1.38
KCNQ4P56696 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.65■■□□□ 1.38
KCNQ4P56696 LINC01006-201ENST00000333319 2292 ntBASIC23.65■■□□□ 1.38
KCNQ4P56696 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
KCNQ4P56696 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.65■■□□□ 1.38
KCNQ4P56696 UPF3AP3-201ENST00000420996 769 ntBASIC23.65■■□□□ 1.38
KCNQ4P56696 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.65■■□□□ 1.38
KCNQ4P56696 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 AC012640.2-201ENST00000561606 901 ntBASIC23.65■■□□□ 1.38
KCNQ4P56696 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC23.65■■□□□ 1.38
KCNQ4P56696 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNQ4P56696 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
KCNQ4P56696 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
KCNQ4P56696 AL157384.1-201ENST00000445995 2473 ntBASIC23.65■■□□□ 1.38
KCNQ4P56696 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNQ4P56696 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
KCNQ4P56696 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNQ4P56696 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
KCNQ4P56696 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNQ4P56696 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNQ4P56696 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
KCNQ4P56696 RPSAP43-201ENST00000402237 625 ntBASIC23.64■■□□□ 1.37
KCNQ4P56696 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 AC098831.1-202ENST00000438821 336 ntBASIC23.64■■□□□ 1.37
KCNQ4P56696 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.64■■□□□ 1.37
KCNQ4P56696 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC23.64■■□□□ 1.37
KCNQ4P56696 AP001160.2-201ENST00000596071 487 ntBASIC23.64■■□□□ 1.37
KCNQ4P56696 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.64■■□□□ 1.37
KCNQ4P56696 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 PCDHAC2-203ENST00000615316 3011 ntBASIC23.64■■□□□ 1.37
KCNQ4P56696 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.64■■□□□ 1.37
KCNQ4P56696 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNQ4P56696 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNQ4P56696 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
KCNQ4P56696 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNQ4P56696 TP73-AS1-210ENST00000637775 1455 ntBASIC23.63■■□□□ 1.37
KCNQ4P56696 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNQ4P56696 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.63■■□□□ 1.37
KCNQ4P56696 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNQ4P56696 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KCNQ4P56696 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC23.63■■□□□ 1.37
KCNQ4P56696 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.63■■□□□ 1.37
KCNQ4P56696 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
KCNQ4P56696 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.63■■□□□ 1.37
KCNQ4P56696 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms