Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
FOXG1P55316 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXG1P55316 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXG1P55316 AC093525.10-201ENST00000625130 1569 ntBASIC16.31■□□□□ 0.2
FOXG1P55316 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 ARMC10P1-201ENST00000313754 855 ntBASIC16.31■□□□□ 0.2
FOXG1P55316 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
FOXG1P55316 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXG1P55316 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXG1P55316 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXG1P55316 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
FOXG1P55316 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.31■□□□□ 0.2
FOXG1P55316 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.31■□□□□ 0.2
FOXG1P55316 AC104390.1-201ENST00000555663 520 ntBASIC16.31■□□□□ 0.2
FOXG1P55316 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.31■□□□□ 0.2
FOXG1P55316 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXG1P55316 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXG1P55316 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.31■□□□□ 0.2
FOXG1P55316 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
FOXG1P55316 MYC-208ENST00000641036 567 ntBASIC16.31■□□□□ 0.2
FOXG1P55316 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXG1P55316 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
FOXG1P55316 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.31■□□□□ 0.2
FOXG1P55316 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FOXG1P55316 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
FOXG1P55316 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
FOXG1P55316 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
FOXG1P55316 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
FOXG1P55316 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
FOXG1P55316 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
FOXG1P55316 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.3■□□□□ 0.2
FOXG1P55316 HOMER2P1-201ENST00000455653 964 ntBASIC16.3■□□□□ 0.2
FOXG1P55316 RASA4DP-201ENST00000460726 1199 ntBASIC16.3■□□□□ 0.2
FOXG1P55316 AC092597.1-201ENST00000487352 616 ntBASIC16.3■□□□□ 0.2
FOXG1P55316 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.3■□□□□ 0.2
FOXG1P55316 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.3■□□□□ 0.2
FOXG1P55316 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.3■□□□□ 0.2
FOXG1P55316 AC010240.3-201ENST00000607688 395 ntBASIC16.3■□□□□ 0.2
FOXG1P55316 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
FOXG1P55316 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.29■□□□□ 0.2
FOXG1P55316 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXG1P55316 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXG1P55316 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 STARP1-201ENST00000397973 869 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 AC112907.2-201ENST00000448639 330 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.29■□□□□ 0.2
FOXG1P55316 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 MIR3917-201ENST00000580971 93 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
FOXG1P55316 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.29■□□□□ 0.2
FOXG1P55316 HYMAI.1-201ENST00000620949 238 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 AC079602.3-201ENST00000623931 403 ntBASIC16.29■□□□□ 0.2
FOXG1P55316 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms