Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC091390.4-202ENST00000476426 537 ntBASIC19.8■□□□□ 0.76
SSR1P43307 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.8■□□□□ 0.76
SSR1P43307 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.8■□□□□ 0.76
SSR1P43307 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SSR1P43307 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.8■□□□□ 0.76
SSR1P43307 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 AC011298.2-201ENST00000617989 482 ntBASIC19.8■□□□□ 0.76
SSR1P43307 AL031985.4-201ENST00000642138 673 ntBASIC19.8■□□□□ 0.76
SSR1P43307 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.8■□□□□ 0.76
SSR1P43307 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSR1P43307 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SSR1P43307 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
SSR1P43307 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SSR1P43307 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.79■□□□□ 0.76
SSR1P43307 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 AL158047.1-201ENST00000445918 881 ntBASIC19.79■□□□□ 0.76
SSR1P43307 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.79■□□□□ 0.76
SSR1P43307 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.79■□□□□ 0.76
SSR1P43307 AC142381.4-202ENST00000563973 229 ntBASIC19.79■□□□□ 0.76
SSR1P43307 RARRES2P10-201ENST00000564312 460 ntBASIC19.79■□□□□ 0.76
SSR1P43307 AC073195.1-201ENST00000607241 877 ntBASIC19.79■□□□□ 0.76
SSR1P43307 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SSR1P43307 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.79■□□□□ 0.76
SSR1P43307 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 AC007613.1-201ENST00000572811 2597 ntBASIC19.78■□□□□ 0.76
SSR1P43307 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.78■□□□□ 0.76
SSR1P43307 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.78■□□□□ 0.76
SSR1P43307 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.78■□□□□ 0.76
SSR1P43307 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
SSR1P43307 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.78■□□□□ 0.76
SSR1P43307 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSR1P43307 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.77■□□□□ 0.76
SSR1P43307 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.77■□□□□ 0.76
SSR1P43307 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.77■□□□□ 0.76
SSR1P43307 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SSR1P43307 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SSR1P43307 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms