Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.9■■□□□ 1.26
PDE6BP35913 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDE6BP35913 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.9■■□□□ 1.26
PDE6BP35913 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.9■■□□□ 1.26
PDE6BP35913 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
PDE6BP35913 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.9■■□□□ 1.26
PDE6BP35913 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.9■■□□□ 1.26
PDE6BP35913 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.9■■□□□ 1.26
PDE6BP35913 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDE6BP35913 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PDE6BP35913 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.25
PDE6BP35913 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.89■■□□□ 1.25
PDE6BP35913 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.89■■□□□ 1.25
PDE6BP35913 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.89■■□□□ 1.25
PDE6BP35913 BX842568.4-201ENST00000421222 227 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.89■■□□□ 1.25
PDE6BP35913 AC073648.2-201ENST00000510116 352 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC22.89■■□□□ 1.25
PDE6BP35913 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.89■■□□□ 1.25
PDE6BP35913 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
PDE6BP35913 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.89■■□□□ 1.25
PDE6BP35913 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.89■■□□□ 1.25
PDE6BP35913 AL355877.3-201ENST00000622820 899 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
PDE6BP35913 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PDE6BP35913 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
PDE6BP35913 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PDE6BP35913 ZNF259P1-201ENST00000407656 1365 ntBASIC22.89■■□□□ 1.25
PDE6BP35913 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.89■■□□□ 1.25
PDE6BP35913 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PDE6BP35913 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
PDE6BP35913 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDE6BP35913 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.88■■□□□ 1.25
PDE6BP35913 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.88■■□□□ 1.25
PDE6BP35913 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PDE6BP35913 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
PDE6BP35913 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.88■■□□□ 1.25
PDE6BP35913 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.88■■□□□ 1.25
PDE6BP35913 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC22.88■■□□□ 1.25
PDE6BP35913 MIR7706-201ENST00000613747 67 ntBASIC22.88■■□□□ 1.25
PDE6BP35913 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.88■■□□□ 1.25
PDE6BP35913 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
PDE6BP35913 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PDE6BP35913 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PDE6BP35913 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.87■■□□□ 1.25
PDE6BP35913 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
PDE6BP35913 FAM220CP-201ENST00000395253 831 ntBASIC22.87■■□□□ 1.25
PDE6BP35913 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.87■■□□□ 1.25
PDE6BP35913 AL049840.3-201ENST00000602669 611 ntBASIC22.87■■□□□ 1.25
PDE6BP35913 ANKRD20A8P-203ENST00000641373 517 ntBASIC22.87■■□□□ 1.25
PDE6BP35913 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.87■■□□□ 1.25
PDE6BP35913 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 AL137060.1-201ENST00000618151 2648 ntBASIC22.87■■□□□ 1.25
PDE6BP35913 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC22.87■■□□□ 1.25
PDE6BP35913 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDE6BP35913 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 Z98044.1-201ENST00000632503 1764 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 KRT8P50-201ENST00000562022 1438 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.86■■□□□ 1.25
PDE6BP35913 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC22.86■■□□□ 1.25
PDE6BP35913 MIR940-201ENST00000401276 94 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PDE6BP35913 SCARNA2-201ENST00000458748 420 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PDE6BP35913 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.86■■□□□ 1.25
PDE6BP35913 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.86■■□□□ 1.25
PDE6BP35913 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.86■■□□□ 1.25
PDE6BP35913 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.86■■□□□ 1.25
PDE6BP35913 FAM215A-202ENST00000632077 792 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.86■■□□□ 1.25
PDE6BP35913 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.86■■□□□ 1.25
PDE6BP35913 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDE6BP35913 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.86■■□□□ 1.25
PDE6BP35913 AC112907.3-201ENST00000577781 2400 ntBASIC22.86■■□□□ 1.25
PDE6BP35913 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms