Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.71■□□□□ 0.59
KRT4P19013 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT4P19013 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
KRT4P19013 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
KRT4P19013 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
KRT4P19013 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT4P19013 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT4P19013 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT4P19013 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
KRT4P19013 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
KRT4P19013 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT4P19013 TSPY6P-201ENST00000448518 926 ntBASIC18.7■□□□□ 0.58
KRT4P19013 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT4P19013 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT4P19013 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
KRT4P19013 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.7■□□□□ 0.58
KRT4P19013 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.7■□□□□ 0.58
KRT4P19013 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT4P19013 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT4P19013 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT4P19013 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT4P19013 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.69■□□□□ 0.58
KRT4P19013 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 AC139713.2-201ENST00000641328 2723 ntBASIC18.69■□□□□ 0.58
KRT4P19013 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT4P19013 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT4P19013 KRT8P32-201ENST00000512863 1461 ntBASIC18.69■□□□□ 0.58
KRT4P19013 AC138028.4-201ENST00000564984 1845 ntBASIC18.69■□□□□ 0.58
KRT4P19013 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KRT4P19013 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT4P19013 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT4P19013 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT4P19013 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 AC012313.1-201ENST00000593393 3059 ntBASIC18.68■□□□□ 0.58
KRT4P19013 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 AC112777.1-201ENST00000540175 1423 ntBASIC18.68■□□□□ 0.58
KRT4P19013 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT4P19013 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT4P19013 AC083880.1-201ENST00000608266 535 ntBASIC18.68■□□□□ 0.58
KRT4P19013 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.68■□□□□ 0.58
KRT4P19013 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT4P19013 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
KRT4P19013 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
KRT4P19013 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT4P19013 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 AL357033.4-201ENST00000617703 1807 ntBASIC18.67■□□□□ 0.58
KRT4P19013 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT4P19013 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT4P19013 NBPF21P-201ENST00000425093 1451 ntBASIC18.67■□□□□ 0.58
KRT4P19013 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KRT4P19013 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT4P19013 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms