Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.38■■□□□ 1.01
CAPN2P17655 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
CAPN2P17655 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPN2P17655 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.38■■□□□ 1.01
CAPN2P17655 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CAPN2P17655 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN2P17655 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
CAPN2P17655 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN2P17655 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPN2P17655 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN2P17655 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN2P17655 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CAPN2P17655 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN2P17655 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN2P17655 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPN2P17655 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN2P17655 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.37■■□□□ 1.01
CAPN2P17655 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 KRT18P13-201ENST00000400056 1290 ntBASIC21.37■■□□□ 1.01
CAPN2P17655 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.37■■□□□ 1.01
CAPN2P17655 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPN2P17655 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPN2P17655 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPN2P17655 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN2P17655 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN2P17655 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 AL162741.1-201ENST00000565563 1558 ntBASIC21.36■■□□□ 1.01
CAPN2P17655 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN2P17655 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN2P17655 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 AC079781.3-201ENST00000449110 356 ntBASIC21.36■■□□□ 1.01
CAPN2P17655 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.36■■□□□ 1.01
CAPN2P17655 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPN2P17655 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN2P17655 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN2P17655 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN2P17655 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN2P17655 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
CAPN2P17655 MIR662-201ENST00000384847 95 ntBASIC21.35■■□□□ 1.01
CAPN2P17655 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 HLA-F-220ENST00000434407 884 ntBASIC21.35■■□□□ 1.01
CAPN2P17655 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN2P17655 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN2P17655 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.35■■□□□ 1.01
CAPN2P17655 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.35■■□□□ 1.01
CAPN2P17655 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.35■■□□□ 1.01
CAPN2P17655 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.35■■□□□ 1.01
CAPN2P17655 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CAPN2P17655 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN2P17655 KRT8P11-201ENST00000409686 1436 ntBASIC21.35■■□□□ 1.01
CAPN2P17655 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN2P17655 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPN2P17655 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPN2P17655 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPN2P17655 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CAPN2P17655 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
CAPN2P17655 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPN2P17655 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms