Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.81■□□□□ 0.6
SRFP11831 AC068587.9-201ENST00000641814 219 ntBASIC18.81■□□□□ 0.6
SRFP11831 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFP11831 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.81■□□□□ 0.6
SRFP11831 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.81■□□□□ 0.6
SRFP11831 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRFP11831 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SRFP11831 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
SRFP11831 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.8■□□□□ 0.6
SRFP11831 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRFP11831 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SRFP11831 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 HNRNPDP1-201ENST00000439535 754 ntBASIC18.8■□□□□ 0.6
SRFP11831 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.8■□□□□ 0.6
SRFP11831 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 MTDHP3-201ENST00000594186 672 ntBASIC18.8■□□□□ 0.6
SRFP11831 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SRFP11831 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.8■□□□□ 0.6
SRFP11831 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRFP11831 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.8■□□□□ 0.6
SRFP11831 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SRFP11831 IRX1P1-201ENST00000438849 1838 ntBASIC18.79■□□□□ 0.6
SRFP11831 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 Z98044.1-201ENST00000632503 1764 ntBASIC18.79■□□□□ 0.6
SRFP11831 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.79■□□□□ 0.6
SRFP11831 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.79■□□□□ 0.6
SRFP11831 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFP11831 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFP11831 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.79■□□□□ 0.6
SRFP11831 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 AL691403.2-201ENST00000618460 490 ntBASIC18.79■□□□□ 0.6
SRFP11831 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 KRT8P50-201ENST00000562022 1438 ntBASIC18.79■□□□□ 0.6
SRFP11831 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 AC007375.3-201ENST00000600936 2314 ntBASIC18.79■□□□□ 0.6
SRFP11831 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.79■□□□□ 0.6
SRFP11831 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRFP11831 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFP11831 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SRFP11831 TP73-AS1-210ENST00000637775 1455 ntBASIC18.78■□□□□ 0.6
SRFP11831 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFP11831 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFP11831 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFP11831 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRFP11831 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFP11831 PGAM5P1-201ENST00000518923 814 ntBASIC18.78■□□□□ 0.6
SRFP11831 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 AC145285.3-201ENST00000564603 959 ntBASIC18.78■□□□□ 0.6
SRFP11831 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
SRFP11831 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.78■□□□□ 0.6
SRFP11831 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRFP11831 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
SRFP11831 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRFP11831 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SRFP11831 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFP11831 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.77■□□□□ 0.6
SRFP11831 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFP11831 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.77■□□□□ 0.6
SRFP11831 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.77■□□□□ 0.6
SRFP11831 AC008687.5-201ENST00000593746 558 ntBASIC18.77■□□□□ 0.6
SRFP11831 AC027601.4-201ENST00000611259 610 ntBASIC18.77■□□□□ 0.6
SRFP11831 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFP11831 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.77■□□□□ 0.6
SRFP11831 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRFP11831 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.77■□□□□ 0.6
SRFP11831 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRFP11831 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SRFP11831 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SRFP11831 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SRFP11831 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.76■□□□□ 0.59
SRFP11831 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFP11831 AC112777.1-201ENST00000540175 1423 ntBASIC18.76■□□□□ 0.59
SRFP11831 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRFP11831 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms