Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC32.52■■■□□ 2.8
TOP2AP11388 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TOP2AP11388 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC32.52■■■□□ 2.8
TOP2AP11388 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
TOP2AP11388 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
TOP2AP11388 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC32.51■■■□□ 2.8
TOP2AP11388 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC32.51■■■□□ 2.8
TOP2AP11388 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC32.51■■■□□ 2.8
TOP2AP11388 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
TOP2AP11388 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC32.51■■■□□ 2.8
TOP2AP11388 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC32.51■■■□□ 2.8
TOP2AP11388 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TOP2AP11388 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
TOP2AP11388 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TOP2AP11388 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TOP2AP11388 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
TOP2AP11388 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
TOP2AP11388 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC32.51■■■□□ 2.79
TOP2AP11388 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC32.51■■■□□ 2.79
TOP2AP11388 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC32.51■■■□□ 2.79
TOP2AP11388 AL355877.3-201ENST00000622820 899 ntBASIC32.51■■■□□ 2.79
TOP2AP11388 AC117500.6-201ENST00000624871 588 ntBASIC32.51■■■□□ 2.79
TOP2AP11388 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC32.5■■■□□ 2.79
TOP2AP11388 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC32.5■■■□□ 2.79
TOP2AP11388 AF186996.4-201ENST00000467186 377 ntBASIC32.5■■■□□ 2.79
TOP2AP11388 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC32.5■■■□□ 2.79
TOP2AP11388 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 RPL18-209ENST00000550645 463 ntTSL 5 BASIC32.5■■■□□ 2.79
TOP2AP11388 RPL18-214ENST00000552588 559 ntTSL 3 BASIC32.5■■■□□ 2.79
TOP2AP11388 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC32.5■■■□□ 2.79
TOP2AP11388 PAM16-208ENST00000573553 722 ntTSL 2 BASIC32.5■■■□□ 2.79
TOP2AP11388 AP001269.4-201ENST00000609611 512 ntBASIC32.5■■■□□ 2.79
TOP2AP11388 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 AL024508.2-201ENST00000607749 1894 ntBASIC32.5■■■□□ 2.79
TOP2AP11388 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TOP2AP11388 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TOP2AP11388 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TOP2AP11388 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC32.49■■■□□ 2.79
TOP2AP11388 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC32.49■■■□□ 2.79
TOP2AP11388 KRT18P13-201ENST00000400056 1290 ntBASIC32.49■■■□□ 2.79
TOP2AP11388 KRT18P58-201ENST00000527480 1120 ntBASIC32.49■■■□□ 2.79
TOP2AP11388 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC32.49■■■□□ 2.79
TOP2AP11388 AL138831.2-201ENST00000606564 490 ntBASIC32.49■■■□□ 2.79
TOP2AP11388 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TOP2AP11388 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TOP2AP11388 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
TOP2AP11388 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TOP2AP11388 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC32.49■■■□□ 2.79
TOP2AP11388 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC32.49■■■□□ 2.79
TOP2AP11388 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC32.48■■■□□ 2.79
TOP2AP11388 MEG3-211ENST00000452514 461 ntTSL 3 BASIC32.48■■■□□ 2.79
TOP2AP11388 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC32.48■■■□□ 2.79
TOP2AP11388 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC32.48■■■□□ 2.79
TOP2AP11388 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC32.48■■■□□ 2.79
TOP2AP11388 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 AC112777.1-201ENST00000540175 1423 ntBASIC32.48■■■□□ 2.79
TOP2AP11388 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC32.48■■■□□ 2.79
TOP2AP11388 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC32.48■■■□□ 2.79
TOP2AP11388 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
TOP2AP11388 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
TOP2AP11388 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC32.47■■■□□ 2.79
TOP2AP11388 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC32.47■■■□□ 2.79
TOP2AP11388 RPP21-221ENST00000428040 594 ntTSL 2 BASIC32.47■■■□□ 2.79
TOP2AP11388 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC32.47■■■□□ 2.79
TOP2AP11388 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC32.47■■■□□ 2.79
TOP2AP11388 AC106730.1-201ENST00000566722 1090 ntBASIC32.47■■■□□ 2.79
TOP2AP11388 GZMM-202ENST00000592501 941 ntTSL 3 BASIC32.47■■■□□ 2.79
TOP2AP11388 AL591684.3-201ENST00000605187 298 ntBASIC32.47■■■□□ 2.79
TOP2AP11388 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC32.47■■■□□ 2.79
TOP2AP11388 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC32.47■■■□□ 2.79
TOP2AP11388 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC32.47■■■□□ 2.79
TOP2AP11388 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TOP2AP11388 RBM17P3-201ENST00000417687 1192 ntBASIC32.46■■■□□ 2.79
TOP2AP11388 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC32.46■■■□□ 2.79
TOP2AP11388 RNPS1P1-201ENST00000507437 918 ntBASIC32.46■■■□□ 2.79
TOP2AP11388 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
TOP2AP11388 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC32.46■■■□□ 2.79
TOP2AP11388 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TOP2AP11388 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC32.46■■■□□ 2.79
TOP2AP11388 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC32.46■■■□□ 2.79
TOP2AP11388 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
TOP2AP11388 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TOP2AP11388 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
TOP2AP11388 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
TOP2AP11388 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms