Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
P04436 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
P04436 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.01■□□□□ 0.31
P04436 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.01■□□□□ 0.31
P04436 AC104390.1-201ENST00000555663 520 ntBASIC17.01■□□□□ 0.31
P04436 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.01■□□□□ 0.31
P04436 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
P04436 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
P04436 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17■□□□□ 0.31
P04436 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
P04436 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17■□□□□ 0.31
P04436 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17■□□□□ 0.31
P04436 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04436 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
P04436 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17■□□□□ 0.31
P04436 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17■□□□□ 0.31
P04436 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
P04436 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17■□□□□ 0.31
P04436 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04436 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17■□□□□ 0.31
P04436 ZNF444P1-201ENST00000559497 298 ntBASIC17■□□□□ 0.31
P04436 MIR3917-201ENST00000580971 93 ntBASIC17■□□□□ 0.31
P04436 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17■□□□□ 0.31
P04436 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 AL358472.4-201ENST00000633140 710 ntBASIC17■□□□□ 0.31
P04436 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
P04436 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 AL357033.4-201ENST00000617703 1807 ntBASIC17■□□□□ 0.31
P04436 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17■□□□□ 0.31
P04436 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17■□□□□ 0.31
P04436 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P04436 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
P04436 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
P04436 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
P04436 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17■□□□□ 0.31
P04436 Z98044.1-201ENST00000632503 1764 ntBASIC17■□□□□ 0.31
P04436 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.99■□□□□ 0.31
P04436 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 PCED1CP-201ENST00000419887 785 ntBASIC16.99■□□□□ 0.31
P04436 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.99■□□□□ 0.31
P04436 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 VENTXP5-201ENST00000523979 775 ntBASIC16.99■□□□□ 0.31
P04436 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.99■□□□□ 0.31
P04436 AC009065.1-201ENST00000564055 1225 ntBASIC16.99■□□□□ 0.31
P04436 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.99■□□□□ 0.31
P04436 AC010240.3-201ENST00000607688 395 ntBASIC16.99■□□□□ 0.31
P04436 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.99■□□□□ 0.31
P04436 AL157888.1-201ENST00000631930 593 ntBASIC16.99■□□□□ 0.31
P04436 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.99■□□□□ 0.31
P04436 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
P04436 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.99■□□□□ 0.31
P04436 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P04436 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.98■□□□□ 0.31
P04436 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
P04436 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
P04436 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.98■□□□□ 0.31
P04436 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.98■□□□□ 0.31
P04436 FAM86EP-206ENST00000510506 987 ntBASIC16.98■□□□□ 0.31
P04436 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.98■□□□□ 0.31
P04436 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 AP000550.4-202ENST00000639755 178 ntBASIC16.98■□□□□ 0.31
P04436 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
P04436 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P04436 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.98■□□□□ 0.31
P04436 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
P04436 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms