Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A1P02452 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
COL1A1P02452 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
COL1A1P02452 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
COL1A1P02452 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.39■■□□□ 1.17
COL1A1P02452 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.39■■□□□ 1.17
COL1A1P02452 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.39■■□□□ 1.17
COL1A1P02452 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.39■■□□□ 1.17
COL1A1P02452 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.39■■□□□ 1.17
COL1A1P02452 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.39■■□□□ 1.17
COL1A1P02452 AL732292.2-201ENST00000609649 430 ntBASIC22.39■■□□□ 1.17
COL1A1P02452 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
COL1A1P02452 AL499627.1-201ENST00000569373 2188 ntBASIC22.39■■□□□ 1.17
COL1A1P02452 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A1P02452 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL1A1P02452 AC099343.3-201ENST00000605834 2503 ntBASIC22.38■■□□□ 1.17
COL1A1P02452 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A1P02452 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COL1A1P02452 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.38■■□□□ 1.17
COL1A1P02452 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.38■■□□□ 1.17
COL1A1P02452 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL1A1P02452 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A1P02452 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A1P02452 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
COL1A1P02452 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.37■■□□□ 1.17
COL1A1P02452 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.37■■□□□ 1.17
COL1A1P02452 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 IGHGP-201ENST00000390555 1178 ntBASIC22.37■■□□□ 1.17
COL1A1P02452 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 AC005332.3-201ENST00000589904 676 ntBASIC22.37■■□□□ 1.17
COL1A1P02452 GPR32P1-201ENST00000601788 811 ntBASIC22.37■■□□□ 1.17
COL1A1P02452 AC023511.2-201ENST00000618803 211 ntBASIC22.37■■□□□ 1.17
COL1A1P02452 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.37■■□□□ 1.17
COL1A1P02452 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A1P02452 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.37■■□□□ 1.17
COL1A1P02452 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
COL1A1P02452 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC22.36■■□□□ 1.17
COL1A1P02452 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.36■■□□□ 1.17
COL1A1P02452 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
COL1A1P02452 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.36■■□□□ 1.17
COL1A1P02452 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
COL1A1P02452 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
COL1A1P02452 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A1P02452 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A1P02452 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC22.35■■□□□ 1.17
COL1A1P02452 AP003733.1-201ENST00000491725 852 ntBASIC22.35■■□□□ 1.17
COL1A1P02452 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 AC104692.2-201ENST00000603054 253 ntBASIC22.35■■□□□ 1.17
COL1A1P02452 AL121772.3-201ENST00000610840 674 ntBASIC22.35■■□□□ 1.17
COL1A1P02452 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.35■■□□□ 1.17
COL1A1P02452 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.35■■□□□ 1.17
COL1A1P02452 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
COL1A1P02452 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL1A1P02452 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COL1A1P02452 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.34■■□□□ 1.17
COL1A1P02452 EMBP1-201ENST00000458200 901 ntBASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms