Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.58■□□□□ 0.4
CLPTM1O96005 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.58■□□□□ 0.4
CLPTM1O96005 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.58■□□□□ 0.4
CLPTM1O96005 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CLPTM1O96005 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.58■□□□□ 0.4
CLPTM1O96005 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.58■□□□□ 0.4
CLPTM1O96005 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLPTM1O96005 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLPTM1O96005 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.57■□□□□ 0.4
CLPTM1O96005 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.57■□□□□ 0.4
CLPTM1O96005 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLPTM1O96005 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 MCRIP2P1-201ENST00000394346 511 ntBASIC17.57■□□□□ 0.4
CLPTM1O96005 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.57■□□□□ 0.4
CLPTM1O96005 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 AC142086.2-201ENST00000569753 217 ntBASIC17.57■□□□□ 0.4
CLPTM1O96005 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.57■□□□□ 0.4
CLPTM1O96005 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 CYP2T3P-201ENST00000601990 817 ntBASIC17.57■□□□□ 0.4
CLPTM1O96005 AC100791.3-201ENST00000617619 330 ntBASIC17.57■□□□□ 0.4
CLPTM1O96005 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.57■□□□□ 0.4
CLPTM1O96005 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 KRT17P1-201ENST00000399211 1546 ntBASIC17.57■□□□□ 0.4
CLPTM1O96005 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLPTM1O96005 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.56■□□□□ 0.4
CLPTM1O96005 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
CLPTM1O96005 AC108860.2-201ENST00000562760 2183 ntBASIC17.56■□□□□ 0.4
CLPTM1O96005 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.56■□□□□ 0.4
CLPTM1O96005 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.56■□□□□ 0.4
CLPTM1O96005 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.56■□□□□ 0.4
CLPTM1O96005 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.56■□□□□ 0.4
CLPTM1O96005 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLPTM1O96005 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.56■□□□□ 0.4
CLPTM1O96005 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CLPTM1O96005 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLPTM1O96005 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
CLPTM1O96005 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.55■□□□□ 0.4
CLPTM1O96005 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CLPTM1O96005 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.55■□□□□ 0.4
CLPTM1O96005 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 SLC25A6P5-201ENST00000435663 894 ntBASIC17.55■□□□□ 0.4
CLPTM1O96005 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.55■□□□□ 0.4
CLPTM1O96005 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.55■□□□□ 0.4
CLPTM1O96005 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.55■□□□□ 0.4
CLPTM1O96005 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.55■□□□□ 0.4
CLPTM1O96005 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.55■□□□□ 0.4
CLPTM1O96005 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLPTM1O96005 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CLPTM1O96005 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLPTM1O96005 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.55■□□□□ 0.4
CLPTM1O96005 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLPTM1O96005 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CLPTM1O96005 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLPTM1O96005 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLPTM1O96005 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLPTM1O96005 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLPTM1O96005 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms