Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.58■□□□□ 0.24
TRAF3IP2O43734 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 AC009113.1-201ENST00000570267 2443 ntBASIC16.58■□□□□ 0.24
TRAF3IP2O43734 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAF3IP2O43734 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 AC104581.1-202ENST00000635932 2618 ntBASIC16.57■□□□□ 0.24
TRAF3IP2O43734 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 LINC01568-207ENST00000641790 1380 ntBASIC16.57■□□□□ 0.24
TRAF3IP2O43734 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 ECEL1P2-202ENST00000465689 757 ntBASIC16.57■□□□□ 0.24
TRAF3IP2O43734 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 AC090164.3-201ENST00000610780 2143 ntBASIC16.57■□□□□ 0.24
TRAF3IP2O43734 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAF3IP2O43734 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 AC145285.6-201ENST00000604632 637 ntBASIC16.56■□□□□ 0.24
TRAF3IP2O43734 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAF3IP2O43734 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAF3IP2O43734 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms