Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 MCCD1P1-208ENST00000445732 328 ntBASIC18.4■□□□□ 0.54
IFRD1O00458 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.4■□□□□ 0.54
IFRD1O00458 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.4■□□□□ 0.54
IFRD1O00458 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
IFRD1O00458 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
IFRD1O00458 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFRD1O00458 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
IFRD1O00458 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
IFRD1O00458 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
IFRD1O00458 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFRD1O00458 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFRD1O00458 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IFRD1O00458 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.39■□□□□ 0.53
IFRD1O00458 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFRD1O00458 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.39■□□□□ 0.53
IFRD1O00458 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.39■□□□□ 0.53
IFRD1O00458 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.39■□□□□ 0.53
IFRD1O00458 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
IFRD1O00458 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.39■□□□□ 0.53
IFRD1O00458 AC008622.2-201ENST00000617006 1229 ntBASIC18.39■□□□□ 0.53
IFRD1O00458 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.39■□□□□ 0.53
IFRD1O00458 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
IFRD1O00458 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFRD1O00458 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.39■□□□□ 0.53
IFRD1O00458 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.39■□□□□ 0.53
IFRD1O00458 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
IFRD1O00458 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.39■□□□□ 0.53
IFRD1O00458 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
IFRD1O00458 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.38■□□□□ 0.53
IFRD1O00458 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.38■□□□□ 0.53
IFRD1O00458 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.38■□□□□ 0.53
IFRD1O00458 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.38■□□□□ 0.53
IFRD1O00458 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.38■□□□□ 0.53
IFRD1O00458 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
IFRD1O00458 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
IFRD1O00458 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
IFRD1O00458 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.38■□□□□ 0.53
IFRD1O00458 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 RCC2P3-201ENST00000418112 1537 ntBASIC18.38■□□□□ 0.53
IFRD1O00458 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFRD1O00458 GPAT2P1-201ENST00000444924 1672 ntBASIC18.38■□□□□ 0.53
IFRD1O00458 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.37■□□□□ 0.53
IFRD1O00458 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.37■□□□□ 0.53
IFRD1O00458 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 AL023284.2-201ENST00000405850 579 ntBASIC18.37■□□□□ 0.53
IFRD1O00458 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.37■□□□□ 0.53
IFRD1O00458 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
IFRD1O00458 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.37■□□□□ 0.53
IFRD1O00458 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IFRD1O00458 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
IFRD1O00458 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
IFRD1O00458 AC090164.3-201ENST00000610780 2143 ntBASIC18.37■□□□□ 0.53
IFRD1O00458 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
IFRD1O00458 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFRD1O00458 AC020763.4-201ENST00000623414 4170 ntBASIC18.36■□□□□ 0.53
IFRD1O00458 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.36■□□□□ 0.53
IFRD1O00458 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.36■□□□□ 0.53
IFRD1O00458 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
IFRD1O00458 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.36■□□□□ 0.53
IFRD1O00458 KRT8P32-201ENST00000512863 1461 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms