Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AP3B1O00203 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AP3B1O00203 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
AP3B1O00203 MIR718-201ENST00000390190 70 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 AL023284.2-201ENST00000405850 579 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.82■□□□□ 0.6
AP3B1O00203 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.82■□□□□ 0.6
AP3B1O00203 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.82■□□□□ 0.6
AP3B1O00203 AP005242.2-201ENST00000580065 1175 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 REXO1L10P-201ENST00000615707 1290 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 REXO1L12P-201ENST00000622156 912 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 AC008556.1-201ENST00000610908 2040 ntBASIC18.82■□□□□ 0.6
AP3B1O00203 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
AP3B1O00203 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP3B1O00203 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.82■□□□□ 0.6
AP3B1O00203 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3B1O00203 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
AP3B1O00203 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 AC026471.5-201ENST00000615068 467 ntBASIC18.81■□□□□ 0.6
AP3B1O00203 AC008622.2-201ENST00000617006 1229 ntBASIC18.81■□□□□ 0.6
AP3B1O00203 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3B1O00203 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.81■□□□□ 0.6
AP3B1O00203 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
AP3B1O00203 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
AP3B1O00203 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.8■□□□□ 0.6
AP3B1O00203 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.8■□□□□ 0.6
AP3B1O00203 AL499627.1-201ENST00000569373 2188 ntBASIC18.8■□□□□ 0.6
AP3B1O00203 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3B1O00203 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms