Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM1O00151 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM1O00151 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 AC092368.3-202ENST00000574180 1591 ntBASIC17.73■□□□□ 0.43
PDLIM1O00151 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.73■□□□□ 0.43
PDLIM1O00151 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM1O00151 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM1O00151 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM1O00151 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 AC073592.3-201ENST00000625118 1834 ntBASIC17.72■□□□□ 0.43
PDLIM1O00151 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
PDLIM1O00151 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM1O00151 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.72■□□□□ 0.43
PDLIM1O00151 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM1O00151 HTR7P1-202ENST00000624664 4411 ntBASIC17.72■□□□□ 0.43
PDLIM1O00151 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM1O00151 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM1O00151 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.72■□□□□ 0.43
PDLIM1O00151 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 AC005829.2-201ENST00000571422 1056 ntBASIC17.72■□□□□ 0.43
PDLIM1O00151 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PDLIM1O00151 AC083906.6-201ENST00000641366 219 ntBASIC17.72■□□□□ 0.43
PDLIM1O00151 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDLIM1O00151 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM1O00151 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM1O00151 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PDLIM1O00151 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM1O00151 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.71■□□□□ 0.43
PDLIM1O00151 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM1O00151 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PDLIM1O00151 LINC00896-202ENST00000609602 2128 ntBASIC17.71■□□□□ 0.42
PDLIM1O00151 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDLIM1O00151 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PDLIM1O00151 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.71■□□□□ 0.42
PDLIM1O00151 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PDLIM1O00151 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDLIM1O00151 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms