Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
A0A1W2PRF3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
A0A1W2PRF3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.31■□□□□ 0.04
A0A1W2PRF3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 YBX1P2-201ENST00000489612 999 ntBASIC15.31■□□□□ 0.04
A0A1W2PRF3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 NTF6B-201ENST00000591913 560 ntBASIC15.31■□□□□ 0.04
A0A1W2PRF3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 AC011558.1-201ENST00000623459 338 ntBASIC15.31■□□□□ 0.04
A0A1W2PRF3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 KRT8P3-201ENST00000519669 1449 ntBASIC15.31■□□□□ 0.04
A0A1W2PRF3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
A0A1W2PRF3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
A0A1W2PRF3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 AL512353.2-201ENST00000448759 1962 ntBASIC15.3■□□□□ 0.04
A0A1W2PRF3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 AC092647.4-201ENST00000457211 535 ntBASIC15.3■□□□□ 0.04
A0A1W2PRF3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 AL512604.3-201ENST00000569583 964 ntBASIC15.3■□□□□ 0.04
A0A1W2PRF3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
A0A1W2PRF3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
A0A1W2PRF3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
A0A1W2PRF3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.29■□□□□ 0.04
A0A1W2PRF3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
A0A1W2PRF3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.29■□□□□ 0.04
A0A1W2PRF3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.29■□□□□ 0.04
A0A1W2PRF3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
A0A1W2PRF3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms