Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPBQ9Y5S2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 FGFR3P6-201ENST00000457012 610 ntBASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 AC011840.4-201ENST00000578471 627 ntBASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPBQ9Y5S2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 AC145285.3-201ENST00000564603 959 ntBASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 AC117500.6-201ENST00000624871 588 ntBASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPBQ9Y5S2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 AC106730.1-201ENST00000566722 1090 ntBASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPBQ9Y5S2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 POM121L3P-201ENST00000419331 1163 ntBASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 DDT-206ENST00000430101 573 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 AF186996.4-201ENST00000467186 377 ntBASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 POLD2P1-201ENST00000511220 997 ntBASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 AC139887.3-201ENST00000568585 713 ntBASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPBQ9Y5S2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.08■■■□□ 2.09
CDC42BPBQ9Y5S2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
CDC42BPBQ9Y5S2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms