Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SSX2IPQ9Y2D8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 SPDYE13P-201ENST00000445314 798 ntBASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSX2IPQ9Y2D8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 BX276092.5-203ENST00000456199 560 ntBASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AC092597.1-201ENST00000487352 616 ntBASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AL121672.3-201ENST00000608644 468 ntBASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 AC112497.1-201ENST00000624824 639 ntBASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSX2IPQ9Y2D8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSX2IPQ9Y2D8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX2IPQ9Y2D8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSX2IPQ9Y2D8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 AC011498.5-201ENST00000592027 486 ntBASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 KRT8P7-201ENST00000533003 1432 ntBASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSX2IPQ9Y2D8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 LBX2-AS1-202ENST00000603175 2083 ntBASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 AL121894.2-201ENST00000602977 491 ntBASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 NPAP1P7-201ENST00000613027 823 ntBASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSX2IPQ9Y2D8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 AC087289.5-201ENST00000586076 3175 ntBASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
SSX2IPQ9Y2D8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms