Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 AL592071.1-201ENST00000611956 408 ntBASIC24.34■■□□□ 1.49
SPG7Q9UQ90 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SPG7Q9UQ90 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 RN7SL606P-201ENST00000472779 293 ntBASIC24.33■■□□□ 1.49
SPG7Q9UQ90 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 AC124864.1-201ENST00000623408 392 ntBASIC24.33■■□□□ 1.49
SPG7Q9UQ90 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SPG7Q9UQ90 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
SPG7Q9UQ90 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
SPG7Q9UQ90 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 Z98044.1-201ENST00000632503 1764 ntBASIC24.32■■□□□ 1.48
SPG7Q9UQ90 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 IGHV3-47-201ENST00000425060 335 ntBASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AP000347.1-202ENST00000435868 847 ntBASIC24.32■■□□□ 1.48
SPG7Q9UQ90 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AC099336.1-202ENST00000602961 463 ntBASIC24.32■■□□□ 1.48
SPG7Q9UQ90 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 KRT89P-201ENST00000620027 1478 ntBASIC24.32■■□□□ 1.48
SPG7Q9UQ90 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.32■■□□□ 1.48
SPG7Q9UQ90 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC24.31■■□□□ 1.48
SPG7Q9UQ90 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.31■■□□□ 1.48
SPG7Q9UQ90 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC24.3■■□□□ 1.48
SPG7Q9UQ90 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPG7Q9UQ90 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms