Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 AL732292.2-201ENST00000609649 430 ntBASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PTPN23Q9H3S7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 AL845331.1-201ENST00000424978 1190 ntBASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 LINC00265-3P-201ENST00000447588 903 ntBASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 AL163051.1-201ENST00000569214 1512 ntBASIC28.04■■■□□ 2.08
PTPN23Q9H3S7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 AC111152.3-201ENST00000569699 673 ntBASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 AC005332.3-201ENST00000589904 676 ntBASIC28.03■■■□□ 2.08
PTPN23Q9H3S7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 AL024508.2-201ENST00000607749 1894 ntBASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 AC233702.3-201ENST00000578656 1387 ntBASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 LINC00167-201ENST00000530583 1419 ntBASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTPN23Q9H3S7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTPN23Q9H3S7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 AP005901.3-202ENST00000581653 237 ntBASIC28■■■□□ 2.07
PTPN23Q9H3S7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 AL499627.1-201ENST00000569373 2188 ntBASIC28■■■□□ 2.07
PTPN23Q9H3S7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTPN23Q9H3S7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC28■■■□□ 2.07
PTPN23Q9H3S7 AC091607.1-201ENST00000490318 1060 ntBASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms