Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATXN3LQ9H3M9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATXN3LQ9H3M9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.56■□□□□ 0.72
ATXN3LQ9H3M9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATXN3LQ9H3M9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 KRT18P23-201ENST00000435622 1283 ntBASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 DUSP5P1-201ENST00000441325 1139 ntBASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 MIR3917-201ENST00000580971 93 ntBASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 CLEC4GP1-201ENST00000596555 870 ntBASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ATXN3LQ9H3M9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 IRX1P1-201ENST00000438849 1838 ntBASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 ATP5G2P1-201ENST00000433580 426 ntBASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 AL121894.2-201ENST00000602977 491 ntBASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 AC079602.3-201ENST00000623931 403 ntBASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ATXN3LQ9H3M9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 AC011498.5-201ENST00000592027 486 ntBASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATXN3LQ9H3M9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 BX276092.5-203ENST00000456199 560 ntBASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 AL136038.4-201ENST00000603606 1261 ntBASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 AC092119.3-201ENST00000612618 583 ntBASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATXN3LQ9H3M9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.52■□□□□ 0.71
ATXN3LQ9H3M9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.71
ATXN3LQ9H3M9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms