Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3Q9BZ76 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3Q9BZ76 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.74■□□□□ 0.43
CNTNAP3Q9BZ76 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNTNAP3Q9BZ76 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AC132008.2-207ENST00000454517 770 ntBASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AC092910.1-201ENST00000482027 1129 ntBASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AC091607.1-201ENST00000490318 1060 ntBASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 AL008721.1-201ENST00000609964 604 ntBASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNTNAP3Q9BZ76 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 AC254562.1-201ENST00000417586 456 ntBASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 AP003733.1-201ENST00000491725 852 ntBASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 RNA5SP415-201ENST00000517246 115 ntBASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 KRT8P11-201ENST00000409686 1436 ntBASIC17.72■□□□□ 0.43
CNTNAP3Q9BZ76 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNTNAP3Q9BZ76 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CNTNAP3Q9BZ76 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CNTNAP3Q9BZ76 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CNTNAP3Q9BZ76 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CNTNAP3Q9BZ76 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 TMEM179-206ENST00000616017 1645 ntBASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CNTNAP3Q9BZ76 AC007967.2-201ENST00000432613 625 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms