Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PSMA3-AS1-211ENST00000556225 839 ntTSL 4 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC027104.1-201ENST00000563702 681 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AGGF1P4-201ENST00000568249 801 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 BNIP3P13-201ENST00000599968 566 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC069431.2-201ENST00000604149 1099 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 MRPL35-204ENST00000605125 833 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AL162730.1-201ENST00000605734 292 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AL122125.1-201ENST00000616999 600 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC012150.2-201ENST00000621300 544 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC007792.1-201ENST00000623023 402 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC138305.3-201ENST00000624988 240 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 AC110792.3-201ENST00000595906 1614 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 KARSP3-201ENST00000571212 1504 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 CADM2-203ENST00000407528 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 SUCLA2P2-201ENST00000417269 1309 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 PSMC1P3-201ENST00000453822 1318 ntBASIC11.59□□□□□ -0.55
KRTAP3-3Q9BYR6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
KRTAP3-3Q9BYR6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC11.58□□□□□ -0.55
KRTAP3-3Q9BYR6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 TACC1P1-201ENST00000425494 1454 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC010595.1-201ENST00000507387 1453 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 Y_RNA.61-201ENST00000362835 102 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 RNU5A-2P-201ENST00000384337 116 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 NUDT19P3-201ENST00000404698 555 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 BECN1P2-201ENST00000407947 812 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 RN7SKP169-201ENST00000411124 291 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 CDY14P-201ENST00000431260 1014 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 MTCYBP29-201ENST00000436327 1006 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 MTND4LP16-201ENST00000440828 295 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 UBE2D3P4-201ENST00000441973 436 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC004865.1-201ENST00000442276 1003 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AL445493.2-201ENST00000442684 945 ntTSL 3 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 CDY23P-201ENST00000451661 1014 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 ZNRF2P2-203ENST00000454624 420 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC041039.1-201ENST00000485656 536 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 DUT-207ENST00000559416 635 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 MTND1P15-201ENST00000579262 949 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC134669.1-201ENST00000581275 672 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 QTRT1P1-201ENST00000604344 1078 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AC024589.2-201ENST00000605642 1294 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AL390882.1-201ENST00000618821 594 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 ATP8A2P3-201ENST00000426792 1536 ntBASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC11.58□□□□□ -0.56
KRTAP3-3Q9BYR6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 AC093844.1-201ENST00000514910 1361 ntBASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 ODF2L-213ENST00000478286 1650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 ACYP1-202ENST00000357971 650 ntTSL 3 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 NRIR-201ENST00000366140 799 ntTSL 3 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 LHX9-202ENST00000367388 758 ntTSL 2 BASIC11.57□□□□□ -0.56
KRTAP3-3Q9BYR6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms