Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 PVRIG2P-201ENST00000435460 978 ntBASIC19.44■□□□□ 0.7
LRRC3Q9BY71 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 MIR3180-4-201ENST00000582223 153 ntBASIC19.44■□□□□ 0.7
LRRC3Q9BY71 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRRC3Q9BY71 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC3Q9BY71 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 AC026396.1-201ENST00000419388 421 ntBASIC19.42■□□□□ 0.7
LRRC3Q9BY71 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC3Q9BY71 AL032819.2-201ENST00000624543 2162 ntBASIC19.42■□□□□ 0.7
LRRC3Q9BY71 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.41■□□□□ 0.7
LRRC3Q9BY71 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 TPM4P1-201ENST00000436100 807 ntBASIC19.41■□□□□ 0.7
LRRC3Q9BY71 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 TPSP2-201ENST00000561760 610 ntBASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC3Q9BY71 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 AC093484.2-201ENST00000580996 2166 ntBASIC19.4■□□□□ 0.7
LRRC3Q9BY71 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC3Q9BY71 DRAXINP1-201ENST00000437611 948 ntBASIC19.4■□□□□ 0.7
LRRC3Q9BY71 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms