Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC24.8■■□□□ 1.56
ABCA3Q99758 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
ABCA3Q99758 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
ABCA3Q99758 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC24.8■■□□□ 1.56
ABCA3Q99758 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA3Q99758 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC24.8■■□□□ 1.56
ABCA3Q99758 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC24.8■■□□□ 1.56
ABCA3Q99758 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA3Q99758 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
ABCA3Q99758 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA3Q99758 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ABCA3Q99758 AC007375.3-201ENST00000600936 2314 ntBASIC24.79■■□□□ 1.56
ABCA3Q99758 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 RPS2P1-201ENST00000434010 821 ntBASIC24.79■■□□□ 1.56
ABCA3Q99758 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.79■■□□□ 1.56
ABCA3Q99758 AC004967.1-201ENST00000453589 447 ntBASIC24.79■■□□□ 1.56
ABCA3Q99758 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 AC027601.4-201ENST00000611259 610 ntBASIC24.79■■□□□ 1.56
ABCA3Q99758 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24.79■■□□□ 1.56
ABCA3Q99758 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.79■■□□□ 1.56
ABCA3Q99758 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
ABCA3Q99758 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.78■■□□□ 1.56
ABCA3Q99758 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.78■■□□□ 1.56
ABCA3Q99758 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 KRT18P41-201ENST00000518924 1277 ntBASIC24.78■■□□□ 1.56
ABCA3Q99758 MTDHP3-201ENST00000594186 672 ntBASIC24.78■■□□□ 1.56
ABCA3Q99758 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
ABCA3Q99758 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.78■■□□□ 1.56
ABCA3Q99758 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
ABCA3Q99758 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.77■■□□□ 1.56
ABCA3Q99758 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
ABCA3Q99758 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC24.77■■□□□ 1.56
ABCA3Q99758 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ABCA3Q99758 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ABCA3Q99758 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
ABCA3Q99758 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC24.77■■□□□ 1.56
ABCA3Q99758 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.77■■□□□ 1.56
ABCA3Q99758 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.77■■□□□ 1.56
ABCA3Q99758 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
ABCA3Q99758 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.77■■□□□ 1.56
ABCA3Q99758 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC24.77■■□□□ 1.56
ABCA3Q99758 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.77■■□□□ 1.56
ABCA3Q99758 NARF-204ENST00000390006 1766 ntTSL 2 BASIC24.77■■□□□ 1.56
ABCA3Q99758 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.77■■□□□ 1.56
ABCA3Q99758 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.77■■□□□ 1.56
ABCA3Q99758 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
ABCA3Q99758 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC24.76■■□□□ 1.55
ABCA3Q99758 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.76■■□□□ 1.55
ABCA3Q99758 AC025062.2-201ENST00000605477 670 ntBASIC24.76■■□□□ 1.55
ABCA3Q99758 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
ABCA3Q99758 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 AC008735.5-201ENST00000623544 497 ntBASIC24.76■■□□□ 1.55
ABCA3Q99758 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
ABCA3Q99758 INTS4P1-201ENST00000438455 1935 ntBASIC24.76■■□□□ 1.55
ABCA3Q99758 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.76■■□□□ 1.55
ABCA3Q99758 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
ABCA3Q99758 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.75■■□□□ 1.55
ABCA3Q99758 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.75■■□□□ 1.55
ABCA3Q99758 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
ABCA3Q99758 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC007967.2-201ENST00000432613 625 ntBASIC24.75■■□□□ 1.55
ABCA3Q99758 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.75■■□□□ 1.55
ABCA3Q99758 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
ABCA3Q99758 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC004832.2-201ENST00000426397 482 ntBASIC24.75■■□□□ 1.55
ABCA3Q99758 FIS1-203ENST00000442303 631 ntTSL 3 BASIC24.75■■□□□ 1.55
ABCA3Q99758 DNAJB3-202ENST00000449667 1266 ntBASIC24.75■■□□□ 1.55
ABCA3Q99758 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC24.75■■□□□ 1.55
ABCA3Q99758 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
ABCA3Q99758 AC040169.1-201ENST00000565382 521 ntBASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms