Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ANO7L1-203ENST00000602586 1720 ntBASIC15.42■□□□□ 0.06
S1PR3Q99500 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
S1PR3Q99500 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.42■□□□□ 0.06
S1PR3Q99500 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.42■□□□□ 0.06
S1PR3Q99500 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
S1PR3Q99500 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
S1PR3Q99500 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
S1PR3Q99500 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
S1PR3Q99500 AC009113.1-201ENST00000570267 2443 ntBASIC15.42■□□□□ 0.06
S1PR3Q99500 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.41■□□□□ 0.06
S1PR3Q99500 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 RCC2P6-201ENST00000526625 1557 ntBASIC15.41■□□□□ 0.06
S1PR3Q99500 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.41■□□□□ 0.06
S1PR3Q99500 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.41■□□□□ 0.06
S1PR3Q99500 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.41■□□□□ 0.06
S1PR3Q99500 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.41■□□□□ 0.06
S1PR3Q99500 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.41■□□□□ 0.06
S1PR3Q99500 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.41■□□□□ 0.06
S1PR3Q99500 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.41■□□□□ 0.06
S1PR3Q99500 AC233702.5-201ENST00000584107 538 ntBASIC15.41■□□□□ 0.06
S1PR3Q99500 AC011298.2-201ENST00000617989 482 ntBASIC15.41■□□□□ 0.06
S1PR3Q99500 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.41■□□□□ 0.06
S1PR3Q99500 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.41■□□□□ 0.06
S1PR3Q99500 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
S1PR3Q99500 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
S1PR3Q99500 AC079598.2-202ENST00000546624 1451 ntBASIC15.4■□□□□ 0.06
S1PR3Q99500 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.4■□□□□ 0.06
S1PR3Q99500 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
S1PR3Q99500 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 AC005082.1-201ENST00000413042 2259 ntBASIC15.4■□□□□ 0.06
S1PR3Q99500 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.4■□□□□ 0.06
S1PR3Q99500 AC091390.4-202ENST00000476426 537 ntBASIC15.4■□□□□ 0.06
S1PR3Q99500 Z99916.2-201ENST00000604037 246 ntBASIC15.4■□□□□ 0.06
S1PR3Q99500 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
S1PR3Q99500 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
S1PR3Q99500 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
S1PR3Q99500 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
S1PR3Q99500 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.39■□□□□ 0.05
S1PR3Q99500 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
S1PR3Q99500 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.39■□□□□ 0.05
S1PR3Q99500 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
S1PR3Q99500 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.39■□□□□ 0.05
S1PR3Q99500 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.39■□□□□ 0.05
S1PR3Q99500 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
S1PR3Q99500 FAM207BP-201ENST00000447172 505 ntBASIC15.39■□□□□ 0.05
S1PR3Q99500 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
S1PR3Q99500 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.39■□□□□ 0.05
S1PR3Q99500 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.39■□□□□ 0.05
S1PR3Q99500 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms