Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 WIZP1-201ENST00000531444 2299 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 KRT18P57-201ENST00000443599 1254 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 NEK4P2-201ENST00000580004 1012 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 AC112497.1-201ENST00000624824 639 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 AC073508.3-201ENST00000619697 1419 ntBASIC15.49■□□□□ 0.07
GAFA1Q96PS6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GAFA1Q96PS6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 AP000593.1-201ENST00000393668 712 ntBASIC15.48■□□□□ 0.07
GAFA1Q96PS6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 KRT8P7-201ENST00000533003 1432 ntBASIC15.48■□□□□ 0.07
GAFA1Q96PS6 KRT8P50-201ENST00000562022 1438 ntBASIC15.48■□□□□ 0.07
GAFA1Q96PS6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
GAFA1Q96PS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 AP000523.1-201ENST00000398242 1049 ntBASIC15.47■□□□□ 0.07
GAFA1Q96PS6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.47■□□□□ 0.07
GAFA1Q96PS6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
GAFA1Q96PS6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms