Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL21A1Q96P44 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL21A1Q96P44 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 AC008040.2-201ENST00000461049 708 ntBASIC17.63■□□□□ 0.41
COL21A1Q96P44 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 DGCR10-201ENST00000609839 495 ntBASIC17.63■□□□□ 0.41
COL21A1Q96P44 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL21A1Q96P44 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL21A1Q96P44 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ANO7L1-203ENST00000602586 1720 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 AC020916.1-201ENST00000587762 1774 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 AP000692.2-201ENST00000608391 879 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 LTB4R2-202ENST00000528054 3092 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 HTR7P1-202ENST00000624664 4411 ntBASIC17.62■□□□□ 0.41
COL21A1Q96P44 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
COL21A1Q96P44 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 UNC93B2-201ENST00000285383 730 ntBASIC17.61■□□□□ 0.41
COL21A1Q96P44 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 RBM17P1-201ENST00000453646 1190 ntBASIC17.61■□□□□ 0.41
COL21A1Q96P44 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
COL21A1Q96P44 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
COL21A1Q96P44 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms