Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 AP003733.1-201ENST00000491725 852 ntBASIC21.73■■□□□ 1.07
CCDC17Q96LX7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 AL163051.1-201ENST00000569214 1512 ntBASIC21.73■■□□□ 1.07
CCDC17Q96LX7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.73■■□□□ 1.07
CCDC17Q96LX7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 CHCHD2P8-201ENST00000429873 447 ntBASIC21.72■■□□□ 1.07
CCDC17Q96LX7 AP002383.4-201ENST00000442518 975 ntBASIC21.72■■□□□ 1.07
CCDC17Q96LX7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 KRT126P-201ENST00000549467 1181 ntBASIC21.72■■□□□ 1.07
CCDC17Q96LX7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 AC092329.2-201ENST00000598402 547 ntBASIC21.72■■□□□ 1.07
CCDC17Q96LX7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC17Q96LX7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 CLEC4GP1-201ENST00000596555 870 ntBASIC21.71■■□□□ 1.07
CCDC17Q96LX7 AC024563.2-201ENST00000603282 481 ntBASIC21.71■■□□□ 1.07
CCDC17Q96LX7 AC092119.3-201ENST00000612618 583 ntBASIC21.71■■□□□ 1.07
CCDC17Q96LX7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC17Q96LX7 KRT89P-201ENST00000620027 1478 ntBASIC21.71■■□□□ 1.07
CCDC17Q96LX7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
CCDC17Q96LX7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 MIR3180-1-201ENST00000580374 94 ntBASIC21.7■■□□□ 1.06
CCDC17Q96LX7 MIR3180-3-201ENST00000584616 94 ntBASIC21.7■■□□□ 1.06
CCDC17Q96LX7 AC005332.3-201ENST00000589904 676 ntBASIC21.7■■□□□ 1.06
CCDC17Q96LX7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC17Q96LX7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC17Q96LX7 Z83836.1-201ENST00000624605 1642 ntBASIC21.69■■□□□ 1.06
CCDC17Q96LX7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC17Q96LX7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms